Pseudomonas syringae pv. tomato DC3000, PSPTO_0310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02140
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00528
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015419 ATPase-coupled sulfate transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30406
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0008272 sulfate transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30406
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst00920 Sulfur metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.3720.10 - IPR035906 MetI-like superfamily 24 282 1.5E-53
CDD cd06261 TM_PBP2 IPR000515 ABC transporter type 1, transmembrane domain MetI-like 70 259 4.42103E-22
FunFam G3DSA:1.10.3720.10:FF:000015 Sulfate ABC transporter, permease CysW - - 24 281 1.1E-124
PANTHER PTHR30406 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN IPR005667 Sulphate ABC transporter permease protein 2 10 282 1.6E-107
SUPERFAMILY SSF161098 MetI-like IPR035906 MetI-like superfamily 23 275 3.4E-54
Pfam PF00528 Binding-protein-dependent transport system inner membrane component IPR000515 ABC transporter type 1, transmembrane domain MetI-like 85 280 2.1E-17
NCBIfam TIGR00969 JCVI: sulfate ABC transporter permease subunit IPR005667 Sulphate ABC transporter permease protein 2 22 277 5.6E-95
NCBIfam TIGR02140 JCVI: sulfate ABC transporter permease subunit CysW IPR011866 Sulphate ABC transporter, permease protein CysW 23 280 4.2E-119

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.