Pseudomonas syringae pv. tomato DC3000, PSPTO_0397
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0051536 | iron-sulfur cluster binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1060.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:1.10.1060.10:FF:000014 | DgcB, Dimethylglycine catabolism | - | - | 234 | 374 | 6.4E-76 |
| Pfam | PF11982 | Domain of unknown function (DUF3483) | IPR021872 | Protein of unknown function DUF3483 | 20 | 236 | 1.6E-88 |
| Pfam | PF02754 | Cysteine-rich domain | IPR004017 | Cysteine-rich domain | 542 | 628 | 9.6E-14 |
| SUPERFAMILY | SSF46548 | alpha-helical ferredoxin | - | - | 237 | 369 | 1.92E-21 |
| Pfam | PF13183 | 4Fe-4S dicluster domain | IPR017896 | 4Fe-4S ferredoxin-type, iron-sulphur binding domain | 258 | 353 | 1.4E-11 |
| Pfam | PF02754 | Cysteine-rich domain | IPR004017 | Cysteine-rich domain | 419 | 498 | 2.3E-4 |
| Gene3D | G3DSA:1.10.1060.10 | - | IPR009051 | Alpha-helical ferredoxin | 236 | 374 | 3.4E-29 |
| PANTHER | PTHR43255 | IRON-SULFUR-BINDING OXIDOREDUCTASE FADF-RELATED-RELATED | - | - | 35 | 649 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.