Pseudomonas syringae pv. tomato DC3000, PSPTO_0417

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01467
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015937 coenzyme A biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02163
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004595 pantetheine-phosphate adenylyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd02163
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01467
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature IPR001980 Phosphopantetheine adenylyltransferase 85 101 1.2E-51
CDD cd02163 PPAT IPR001980 Phosphopantetheine adenylyltransferase 3 155 2.53739E-99
NCBIfam TIGR01510 JCVI: pantetheine-phosphate adenylyltransferase IPR001980 Phosphopantetheine adenylyltransferase 4 156 2.7E-59
PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature IPR001980 Phosphopantetheine adenylyltransferase 49 73 1.2E-51
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 1 156 2.04E-46
NCBIfam TIGR00125 JCVI: cytidyltransferase-like domain IPR004821 Cytidyltransferase-like domain 3 63 4.0E-19
Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. IPR001980 Phosphopantetheine adenylyltransferase 2 158 36.715275
PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature IPR001980 Phosphopantetheine adenylyltransferase 20 41 1.2E-51
PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature IPR001980 Phosphopantetheine adenylyltransferase 2 20 1.2E-51
Pfam PF01467 Cytidylyltransferase-like IPR004821 Cytidyltransferase-like domain 5 133 1.3E-24
PANTHER PTHR21342 PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE - - 2 158 1.3E-44
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 1 159 6.7E-61
PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature IPR001980 Phosphopantetheine adenylyltransferase 112 134 1.2E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.