Pseudomonas syringae pv. tomato DC3000, PSPTO_1009
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR43559 | HYDROLASE YCAC-RELATED | - | - | 3 | 206 | 4.9E-88 |
| CDD | cd01012 | YcaC_related | - | - | 16 | 175 | 4.48763E-70 |
| Pfam | PF00857 | Isochorismatase family | IPR000868 | Isochorismatase-like | 15 | 165 | 1.6E-22 |
| SUPERFAMILY | SSF52499 | Isochorismatase-like hydrolases | IPR036380 | Isochorismatase-like superfamily | 5 | 202 | 2.88E-53 |
| Gene3D | G3DSA:3.40.50.850 | - | IPR036380 | Isochorismatase-like superfamily | 3 | 208 | 5.4E-62 |
| NCBIfam | NF041461 | NCBIFAM: isochorismate family cysteine hydrolase YcaC | IPR048239 | Probable hydrolase YcaC | 6 | 204 | 3.0E-118 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.