Pseudomonas syringae pv. tomato DC3000, PSPTO_1708 (cobO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02572
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02572
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02572
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 11 203 5.2E-64
NCBIfam TIGR00708 JCVI: cob(I)yrinic acid a,c-diamide adenosyltransferase IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 31 202 6.7E-62
CDD cd00561 CobA_ACA IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 34 202 1.59328E-81
Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 34 202 2.2E-55
PANTHER PTHR46638 CORRINOID ADENOSYLTRANSFERASE IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 5 202 4.9E-64
Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain 1 26 1.1E-9
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 13 202 6.64E-68
PIRSF PIRSF015617 Adenosyltransferase_CobA IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 6 203 2.0E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.