Pseudomonas syringae pv. tomato DC3000, PSPTO_2554

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pst02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pst03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd00882	Ras_like_GTPase	-	-	135	272	0.00442013
Pfam	PF06744	Type VI secretion protein IcmF C2-like domain	IPR010623	Type VI secretion system IcmF, C-terminal	1043	1147	2.6E-20
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	121	329	4.29E-9
NCBIfam	TIGR03348	JCVI: type VI secretion system membrane subunit TssM	IPR017731	Type VI secretion system protein TssM1-like	18	1165	0.0
Pfam	PF14331	IcmF-related N-terminal domain	IPR025743	IcmF-related, N-terminal domain	198	446	7.7E-68
Pfam	PF06761	Intracellular multiplication and human macrophage-killing	IPR009612	IcmF-related	497	786	3.6E-68
PANTHER	PTHR36153	INNER MEMBRANE PROTEIN-RELATED	-	-	1	1168	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.