Pseudomonas syringae pv. tomato DC3000, PSPTO_2934
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50891 | Cyclophilin-like | IPR029000 | Cyclophilin-like domain superfamily | 179 | 304 | 7.97E-10 |
| Gene3D | G3DSA:2.40.100.10 | - | IPR029000 | Cyclophilin-like domain superfamily | 176 | 322 | 3.5E-39 |
| PANTHER | PTHR43309 | 5-OXOPROLINASE SUBUNIT C | - | - | 1 | 319 | 8.3E-102 |
| Pfam | PF02626 | Carboxyltransferase domain, subdomain A and B | IPR003778 | Carboxyltransferase domain, subdomain A and B | 24 | 297 | 7.0E-89 |
| NCBIfam | TIGR00724 | JCVI: biotin-dependent carboxylase uncharacterized domain | IPR003778 | Carboxyltransferase domain, subdomain A and B | 1 | 319 | 4.4E-78 |
| SMART | SM00797 | ahs2 | IPR003778 | Carboxyltransferase domain, subdomain A and B | 23 | 314 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.