Pseudomonas syringae pv. tomato DC3000, PSPTO_3033

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01131
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01420 JCVI: PilT/PilU family type 4a pilus ATPase IPR006321 Pilus retraction protein PilT/PilU 7 344 2.3E-128
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 117 250 1.7E-38
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 103 358 3.5E-82
MobiDBLite mobidb-lite consensus disorder prediction - - 357 378 -
MobiDBLite mobidb-lite consensus disorder prediction - - 357 391 -
Gene3D G3DSA:3.30.450.90 - - - 1 101 3.9E-22
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 124 249 0.0016
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 10 338 6.1E-63
CDD cd01131 PilT IPR006321 Pilus retraction protein PilT/PilU 105 325 9.64526E-126
PANTHER PTHR30486 TWITCHING MOTILITY PROTEIN PILT - - 14 344 4.0E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.