Pseudomonas syringae pv. tomato DC3000, PSPTO_3633 (ccmC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30071
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01191
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017004 cytochrome complex assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01191
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015886 heme transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01191
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015232 heme transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01191
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 110 130 9.2E-59
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 166 192 9.2E-59
PANTHER PTHR30071 HEME EXPORTER PROTEIN C IPR045062 Cytochrome c-type biogenesis protein CcsA/CcmC 40 211 4.4E-32
Pfam PF01578 Cytochrome C assembly protein IPR002541 Cytochrome c assembly protein 23 194 3.3E-26
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 131 151 9.2E-59
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 55 72 9.2E-59
NCBIfam TIGR01191 JCVI: heme ABC transporter permease CcmC IPR003557 Cytochrome c-type biogenesis protein CcmC 55 238 1.0E-81
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 214 238 9.2E-59
PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature IPR003557 Cytochrome c-type biogenesis protein CcmC 72 92 9.2E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.