Pseudomonas syringae pv. tomato DC3000, PSPTO_4479
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03547
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF03547
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.1530.20 | - | IPR038770 | Sodium/solute symporter superfamily | 158 | 314 | 8.1E-13 |
| PANTHER | PTHR36838 | AUXIN EFFLUX CARRIER FAMILY PROTEIN | - | - | 5 | 308 | 8.1E-40 |
| Pfam | PF03547 | Membrane transport protein | IPR004776 | Membrane transport protein | 166 | 302 | 2.0E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.