Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0116
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 307 | 340 | - |
| Pfam | PF19933 | Domain of unknown function (DUF6396) | IPR045653 | Domain of unknown function DUF6396 | 231 | 338 | 1.5E-41 |
| SMART | SM00671 | sel1 | IPR006597 | Sel1-like repeat | 128 | 163 | 4.5E-6 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 40 | 272 | 4.8E-19 |
| PANTHER | PTHR11102 | SEL-1-LIKE PROTEIN | - | - | 62 | 207 | 2.5E-9 |
| SUPERFAMILY | SSF81901 | HCP-like | - | - | 56 | 238 | 1.23E-17 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 307 | 326 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.