Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1261

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 653 671 8.5E-12
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 523 691 9.43E-35
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 573 693 9.5E-22
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 455 529 1.39E-11
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 716 802 2.5E-14
Gene3D G3DSA:3.30.450.20 PAS domain - - 307 373 7.7E-14
Gene3D G3DSA:3.40.50.2300 - - - 715 826 1.3E-22
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 306 433 5.2E-8
SUPERFAMILY SSF55781 GAF domain-like - - 4 136 5.89E-16
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 464 528 1.91779E-11
SUPERFAMILY SSF55781 GAF domain-like - - 161 303 2.16E-14
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 713 820 2.6E-17
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 622 636 8.5E-12
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 467 530 9.1E-9
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 716 823 6.69E-25
Coils Coil Coil - - 426 464 -
SMART SM00065 gaf_1 IPR003018 GAF domain 157 304 0.001
Pfam PF08447 PAS fold IPR013655 PAS fold-3 333 420 5.5E-10
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 303 692 1.1E-69
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 466 532 1.1E-10
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 156 306 1.2E-16
Gene3D G3DSA:2.10.70.100 - - - 381 427 2.7E-9
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 533 695 2.4E-37
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 640 650 8.5E-12
SMART SM00065 gaf_1 IPR003018 GAF domain 1 136 0.11
CDD cd00130 PAS IPR000014 PAS domain 317 423 0.00764664
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 574 691 4.0E-15
Gene3D G3DSA:1.10.287.130 - - - 458 530 4.5E-20
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 677 690 8.5E-12
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 321 435 1.09E-11
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 1 140 5.4E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.