Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046565 3-dehydroshikimate dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0046279 3,4-dihydroxybenzoate biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp00360 Phenylalanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00350 Tyrosine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd08342 HPPD_N_like IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal 296 427 2.72003E-23
Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal - - 293 426 1.4E-30
PANTHER PTHR12110 HYDROXYPYRUVATE ISOMERASE - - 1 264 2.2E-92
Gene3D G3DSA:3.10.180.10 - IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 289 435 8.0E-39
CDD cd07250 HPPD_C_like IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal 438 624 8.64874E-64
SUPERFAMILY SSF51658 Xylose isomerase-like IPR036237 Xylose isomerase-like superfamily 1 268 3.87E-74
Gene3D G3DSA:3.20.20.150 - - - 1 269 1.0E-68
Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain 440 564 3.1E-10
Gene3D G3DSA:3.10.180.10 - IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 437 633 8.1E-45
Hamap MF_02238 3-dehydroshikimate dehydratase. IPR043700 3-dehydroshikimate dehydratase 1 627 45.686787
Pfam PF01261 Xylose isomerase-like TIM barrel IPR013022 Xylose isomerase-like, TIM barrel domain 18 261 2.1E-41
Coils Coil Coil - - 64 91 -
SUPERFAMILY SSF54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 292 621 1.88E-62

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.