Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3718 (cysM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004124 cysteine synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006535 cysteine biosynthetic process from serine
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01136
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00270 Cysteine and methionine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00920 Sulfur metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 15 306 3.93E-91
NCBIfam TIGR01138 JCVI: cysteine synthase B IPR005858 Cysteine synthase CysM 20 309 0.0
NCBIfam TIGR01136 JCVI: cysteine synthase IPR005856 Cysteine synthase 22 309 1.3E-120
FunFam G3DSA:3.40.50.1100:FF:000003 Cystathionine beta-synthase - - 55 164 3.2E-43
CDD cd01561 CBS_like - - 26 305 0.0
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 22 298 5.4E-66
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 52 170 3.0E-111
PANTHER PTHR10314 CYSTATHIONINE BETA-SYNTHASE - - 21 311 4.3E-93
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 21 306 3.0E-111
FunFam G3DSA:3.40.50.1100:FF:000029 Cysteine synthase - - 165 306 9.5E-72

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.