Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3956 (nadB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02910
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008734 L-aspartate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42716
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009435 NAD biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42716
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00760 Nicotinate and nicotinamide metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 4 448 5.3E-70
Pfam PF02910 Fumarate reductase flavoprotein C-term IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal 441 521 8.6E-14
Gene3D G3DSA:1.20.58.100 - - - 425 537 4.1E-47
SUPERFAMILY SSF56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 238 353 1.44E-42
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 355 377 6.9E-8
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 8 403 0.0
FunFam G3DSA:1.20.58.100:FF:000002 L-aspartate oxidase - - 426 535 7.7E-48
Coils Coil Coil - - 453 473 -
NCBIfam TIGR00551 JCVI: L-aspartate oxidase IPR005288 L-aspartate oxidase 6 520 0.0
SUPERFAMILY SSF46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily 425 527 7.59E-32
PIRSF PIRSF000171 SDHA_APRA_LASPO - - 1 532 1.3E-30
Pfam PF00890 FAD binding domain IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain 8 392 1.7E-102
Gene3D G3DSA:3.90.700.10 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily 248 361 0.0
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 9 28 6.9E-8
FunFam G3DSA:3.90.700.10:FF:000002 L-aspartate oxidase - - 248 361 2.2E-53
FunFam G3DSA:3.50.50.60:FF:000060 L-aspartate oxidase - - 8 271 6.9E-113
PANTHER PTHR42716 L-ASPARTATE OXIDASE IPR005288 L-aspartate oxidase 5 531 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.