Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4016 (pcaT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00883 JCVI: metabolite/H+ symporter IPR004736 MFS transporter, metabolite:H symporter 28 417 0.0
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 241 430 3.1E-17
FunFam G3DSA:1.20.1250.20:FF:000095 Alpha-ketoglutarate permease - - 17 430 0.0
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 44 382 1.3E-26
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 13 240 2.4E-34
CDD cd17367 MFS_KgtP - - 22 424 0.0
PANTHER PTHR43528 ALPHA-KETOGLUTARATE PERMEASE - - 8 425 0.0
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 17 427 2.88E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.