Pseudomonas fulva 12-X, Psefu_0325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfv02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfv02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2198 2211 2.7E-10
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2118 2132 2.7E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 918 1050 3.5E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 7.98E-22
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 2073 2214 4.5E-22
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2383 2494 9.8E-28
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2383 2494 5.70662E-32
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2027 2213 7.5E-53
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 434 555 2.94E-14
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1576 1673 4.3E-7
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1889 2028 6.2E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1393 1491 1.7E-5
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1399 1496 1.6E-11
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2030 2211 5.5E-36
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 920 1002 5.5E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 917 1042 1.31E-25
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2174 2192 2.7E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1724 1832 1.44E-19
CDD cd16916 HATPase_CheA-like - - 2036 2211 3.2655E-81
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 918 1007 3.68442E-9
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2219 2352 3.3E-23
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2288 2349 1.5E-20
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 98 1.9E-6
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1723 1820 0.012
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1578 1677 3.8E-16
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1576 1674 9.98518E-14
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1401 1706 0.0
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1569 1702 9.0E-28
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1724 1828 3.9124E-10
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2213 2346 2.09E-24
SMART SM00260 chew_2 IPR002545 CheW-like domain 2206 2350 2.6E-35
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1576 1697 1.23E-25
MobiDBLite mobidb-lite consensus disorder prediction - - 1517 1547 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1222 1344 7.06E-17
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1394 1492 4.10161E-9
Coils Coil Coil - - 1927 1947 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1725 1817 1.1E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 918 1022 4.5E-6
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1082 1220 1.3E-18
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2381 2494 9.1E-36
Coils Coil Coil - - 1731 1751 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2382 2499 8.11E-37
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1723 1842 1.2E-23
Coils Coil Coil - - 1015 1035 -
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 137 5.8E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1081 1203 3.66E-19
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 2029 2213 6.2E-61
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1081 1177 0.18
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1223 1350 2.2E-15
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1081 1172 2.15136E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1393 1515 9.03E-26
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 2077 2213 1.5E-15
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1083 1182 5.3E-11
Gene3D G3DSA:3.40.50.2300 - - - 2383 2501 1.5E-40
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1391 1524 6.3E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.