Pseudomonas fulva 12-X, Psefu_0330

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0008168	methyltransferase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF015601	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006364	rRNA processing	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF015601	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR00046	JCVI: RsmE family RNA methyltransferase	IPR006700	Ribosomal RNA small subunit methyltransferase E	19	237	1.6E-58
Gene3D	G3DSA:3.40.1280.10	-	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	73	239	7.9E-61
Gene3D	G3DSA:2.40.240.20	-	-	-	1	69	1.8E-21
Pfam	PF20260	RNA methyltransferase PUA domain	IPR046887	Ribosomal RNA small subunit methyltransferase E, PUA-like domain	19	65	2.6E-13
PIRSF	PIRSF015601	MTase_slr0722	IPR006700	Ribosomal RNA small subunit methyltransferase E	3	238	1.2E-56
SUPERFAMILY	SSF75217	alpha/beta knot	IPR029028	Alpha/beta knot methyltransferases	74	239	3.05E-51
CDD	cd18084	RsmE-like	IPR046886	Ribosomal RNA small subunit methyltransferase E, methyltransferase domain	79	232	1.79302E-64
Pfam	PF04452	RNA methyltransferase domain	IPR046886	Ribosomal RNA small subunit methyltransferase E, methyltransferase domain	74	233	1.6E-52
SUPERFAMILY	SSF88697	PUA domain-like	IPR015947	PUA-like superfamily	3	69	5.72E-16
PANTHER	PTHR30027	RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E	IPR006700	Ribosomal RNA small subunit methyltransferase E	3	233	2.0E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.