Pseudomonas fulva 12-X, Psefu_2781

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008199 ferric iron binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019439 aromatic compound catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0018578 protocatechuate 3,4-dioxygenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.60.130.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006725 cellular aromatic compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00775
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.60.130.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
MetaCyc 4-sulfocatechol degradation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfv00362 Benzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfv01220 Degradation of aromatic compounds 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfv01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfv01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00775 Dioxygenase IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal 34 192 9.6E-13
FunFam G3DSA:2.60.130.10:FF:000001 Protocatechuate 3,4-dioxygenase alpha chain - - 2 202 4.5E-118
NCBIfam TIGR02423 JCVI: protocatechuate 3,4-dioxygenase subunit alpha IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit 9 202 5.1E-75
SUPERFAMILY SSF49482 Aromatic compound dioxygenase IPR015889 Intradiol ring-cleavage dioxygenase, core 4 202 1.83E-57
PANTHER PTHR33711 DIOXYGENASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G02910)-RELATED - - 6 201 2.0E-39
CDD cd03463 3,4-PCD_alpha IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit 6 201 2.65935E-88
Gene3D G3DSA:2.60.130.10 Aromatic compound dioxygenase IPR015889 Intradiol ring-cleavage dioxygenase, core 2 202 7.1E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.