Pseudomonas fulva 12-X, Psefu_4225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.1360.120
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:1901053 sarcosine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01375
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008115 sarcosine oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01375
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfv01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc glycine betaine degradation I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc creatinine degradation II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfv00260 Glycine, serine and threonine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01375 JCVI: sarcosine oxidase subunit gamma family protein IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric 51 202 7.4E-52
Pfam PF04268 Sarcosine oxidase, gamma subunit family IPR007375 Sarcosine oxidase, gamma subunit 52 202 4.4E-80
SUPERFAMILY SSF103025 Folate-binding domain - - 82 205 3.53E-21
Gene3D G3DSA:3.30.70.1520 Heterotetrameric sarcosine oxidase - - 45 125 9.1E-58
Gene3D G3DSA:3.30.1360.120 Probable tRNA modification gtpase trme; domain 1 IPR027266 GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1 36 203 9.1E-58

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.