Pseudomonas fulva 12-X, Psefu_4491

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1077	1097	1.3E-13
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	368	396	0.0038
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1100	1119	1.3E-13
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	512	548	8.7E-7
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	637	670	6.5E-9
PANTHER	PTHR32305	-	-	-	779	1139	5.1E-38
Gene3D	G3DSA:2.180.10.10	-	-	-	400	629	2.5E-37
NCBIfam	TIGR03696	JCVI: RHS repeat-associated core domain	IPR022385	Rhs repeat-associated core	1067	1132	1.0E-20
Gene3D	G3DSA:2.180.10.10	-	-	-	630	1131	2.3E-76
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	595	632	1.0E-5
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	822	853	1.1E-4
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	684	712	0.012
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	637	665	3.6E-7
Gene3D	G3DSA:2.180.10.10	-	-	-	180	397	5.1E-9
Pfam	PF20148	Domain of unknown function (DUF6531)	IPR045351	Domain of unknown function DUF6531	46	120	5.1E-16
Pfam	PF05593	RHS Repeat	IPR031325	RHS repeat	892	929	1.1E-4
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	595	635	3.3E-8
PRINTS	PR00394	RHS protein signature	IPR001826	RHS protein	1024	1044	1.3E-13
SUPERFAMILY	SSF101898	NHL repeat	-	-	476	700	8.37E-6
Pfam	PF03527	RHS protein	IPR001826	RHS protein	1031	1067	1.1E-14
NCBIfam	TIGR01643	JCVI: YD repeat (two copies)	IPR006530	YD repeat	491	531	0.0061

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.