Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a73
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | IPR018392 | LysM domain | 31 | 76 | 2.1E-13 |
| CDD | cd00118 | LysM | IPR018392 | LysM domain | 29 | 77 | 2.49338E-10 |
| PANTHER | PTHR34700 | POTASSIUM BINDING PROTEIN KBP | - | - | 28 | 329 | 3.6E-42 |
| SMART | SM00257 | LysM_2 | IPR018392 | LysM domain | 30 | 78 | 0.0013 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | IPR036779 | LysM domain superfamily | 22 | 84 | 2.5E-15 |
| SUPERFAMILY | SSF54106 | LysM domain | IPR036779 | LysM domain superfamily | 29 | 77 | 7.32E-8 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.