Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a109

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a109
Name
Replicon chromosome
Genomic location 133942 - 135366 (- strand)

Cross-References

RefSeq YP_004351245.1
GI 330806783
Entrez 10468935
INSDC AEA66241.1
NCBI Locus Tag PSEBR_a109
UniParc UPI0002042005
UniProtKB Acc F2KB52
UniProtKB ID F2KB52_PSEBN
UniRef100 UniRef100_A0A0D0RSG6
UniRef50 UniRef50_P07346
UniRef90 UniRef90_P07346

Product

Feature Type CDS
Coding Frame 1
Product Name
aspartate ammonia-lyase
Synonyms
Evidence for Translation
Charge (pH 7) -8.94
Kyte-Doolittle Hydrophobicity Value 0.092
Molecular Weight (kDa) 51.1
Isoelectric Point (pI) 5.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004982 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a109

Human Homologs

Ensembl 110, assembly GRCh38.p14
fumarate hydratase [Source:HGNC Symbol;Acc:HGNC:3700]
E-value: 4.1e-96
Percent Identity: 40.7

References

No references are associated with this feature.