Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a680
Name
Replicon chromosome
Genomic location 841092 - 842441 (+ strand)

Cross-References

RefSeq YP_004351832.1
GI 330807370
Entrez 10469533
INSDC AEA66828.1
NCBI Locus Tag PSEBR_a680
UniParc UPI0002041B2F
UniProtKB Acc F2KBP6
UniProtKB ID F2KBP6_PSEBN
UniRef100 UniRef100_A0A0D0RU85
UniRef50 UniRef50_Q9I700
UniRef90 UniRef90_P28269

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-alanine--pyruvate transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -2.78
Kyte-Doolittle Hydrophobicity Value -0.084
Molecular Weight (kDa) 48.5
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3A8U TRANSFERASE 10/11/09 Crystal Structure of omega-Amino Acid:Pyruvate Aminotransferase Pseudomonas putida 1.4 X-RAY DIFFRACTION 95.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000130 (850 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a680

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 7.0e-37
Percent Identity: 28.0

References

No references are associated with this feature.