Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1419

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.40.50.140	-	IPR012340	Nucleic acid-binding, OB-fold	148	214	2.5E-7
Gene3D	G3DSA:2.40.50.140	-	IPR012340	Nucleic acid-binding, OB-fold	75	145	4.9E-11
SMART	SM00316	S1_6	IPR022967	RNA-binding domain, S1	146	208	0.0052
Pfam	PF13509	S1 domain	IPR039566	Conserved virulence factor B, S1 domain	72	129	2.3E-7
Pfam	PF17783	CvfB-like winged helix domain	IPR040764	Conserved virulence factor B-like, winged helix domain	221	277	1.7E-22
PANTHER	PTHR37296	CONSERVED VIRULENCE FACTOR B	IPR014464	Conserved virulence factor B	2	277	1.0E-92
Pfam	PF13509	S1 domain	IPR039566	Conserved virulence factor B, S1 domain	4	65	1.8E-18
PIRSF	PIRSF012524	YitL_S1	IPR014464	Conserved virulence factor B	1	278	3.3E-90
Gene3D	G3DSA:2.40.50.140	-	IPR012340	Nucleic acid-binding, OB-fold	7	74	4.7E-6
SMART	SM00316	S1_6	IPR022967	RNA-binding domain, S1	71	133	48.0
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	219	277	1.4E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.