Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1969
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:cd01131
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd01131 | PilT | IPR006321 | Pilus retraction protein PilT/PilU | 103 | 324 | 4.19461E-122 |
| Pfam | PF00437 | Type II/IV secretion system protein | IPR001482 | Type II/IV secretion system domain | 79 | 271 | 5.1E-39 |
| Coils | Coil | Coil | - | - | 47 | 67 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 3 | 336 | 1.72E-64 |
| Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 101 | 356 | 1.6E-82 |
| PANTHER | PTHR30486 | TWITCHING MOTILITY PROTEIN PILT | - | - | 6 | 342 | 2.8E-69 |
| Gene3D | G3DSA:3.30.450.90 | - | - | - | 1 | 99 | 7.7E-24 |
| NCBIfam | TIGR01420 | JCVI: PilT/PilU family type 4a pilus ATPase | IPR006321 | Pilus retraction protein PilT/PilU | 3 | 342 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.