Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 43 | 54 | 2.1E-9 |
PANTHER | PTHR30537 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 8 | 293 | 2.6E-69 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 33 | 43 | 2.1E-9 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 9 | 64 | 1.8E-17 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 89 | 292 | 2.5E-34 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 7 | 93 | 1.4E-20 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 162 | 262 | 2.5E-46 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 91 | 293 | 1.32E-37 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 96 | 289 | 2.5E-46 |
CDD | cd08432 | PBP2_GcdR_TrpI_HvrB_AmpR_like | - | - | 93 | 289 | 5.85742E-69 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 22 | 33 | 2.1E-9 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 4 | 85 | 2.28E-19 |