Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3234

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0015627	type II protein secretion system complex	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00885	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0015628	protein secretion by the type II secretion system	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00885	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pba03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00885	Bacterial general secretion pathway protein H signature	IPR002416	Type II secretion system protein GspH	4	18	6.8E-7
Gene3D	G3DSA:3.55.40.10	minor pseudopilin epsh domain	-	-	38	148	3.1E-7
Pfam	PF07963	Prokaryotic N-terminal methylation motif	IPR012902	Prokaryotic N-terminal methylation site	5	28	1.7E-10
Pfam	PF12019	Type II transport protein GspH	IPR022346	General secretion pathway, GspH	45	144	2.8E-5
NCBIfam	TIGR02532	JCVI: prepilin-type N-terminal cleavage/methylation domain	IPR012902	Prokaryotic N-terminal methylation site	6	28	6.1E-10
NCBIfam	TIGR01708	JCVI: type II secretion system minor pseudopilin GspH	IPR002416	Type II secretion system protein GspH	6	149	3.8E-24
PRINTS	PR00885	Bacterial general secretion pathway protein H signature	IPR002416	Type II secretion system protein GspH	19	33	6.8E-7
SUPERFAMILY	SSF54523	Pili subunits	IPR045584	Pilin-like	9	79	1.1E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.