Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_c2g106

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003735 structural constituent of ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005840 ribosome
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR21109
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba03010 Ribosome 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.5.1150 Ribosomal protein S8 IPR038380 Small ribosomal subunit protein bS21 superfamily 16 54 2.9E-18
NCBIfam TIGR00030 JCVI: 30S ribosomal protein S21 IPR001911 Small ribosomal subunit protein bS21 2 59 7.9E-25
Hamap MF_00358 30S ribosomal protein S21 [rpsU]. IPR001911 Small ribosomal subunit protein bS21 1 57 20.977509
Pfam PF01165 Ribosomal protein S21 IPR001911 Small ribosomal subunit protein bS21 4 56 2.6E-22
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Small ribosomal subunit protein bS21 37 47 1.2E-16
MobiDBLite mobidb-lite consensus disorder prediction - - 50 71 -
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Small ribosomal subunit protein bS21 5 13 1.2E-16
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Small ribosomal subunit protein bS21 25 35 1.2E-16
PRINTS PR00976 Ribosomal protein S21 family signature IPR001911 Small ribosomal subunit protein bS21 13 22 1.2E-16
PANTHER PTHR21109 MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 IPR001911 Small ribosomal subunit protein bS21 4 62 7.5E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.