Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5218

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00175
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051536 iron-sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00111
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00406 Cytochrome B5 reductase signature - - 164 175 5.1E-8
Pfam PF00970 Oxidoreductase FAD-binding domain IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain 25 116 5.5E-16
Gene3D G3DSA:3.40.50.80 - IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain 122 256 2.6E-31
CDD cd06215 FNR_iron_sulfur_binding_1 - - 21 252 0.0
CDD cd00207 fer2 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 284 365 2.25076E-19
SUPERFAMILY SSF63380 Riboflavin synthase domain-like IPR017938 Riboflavin synthase-like beta-barrel 13 117 3.87E-28
Gene3D G3DSA:2.40.30.10 Translation factors - - 14 117 2.4E-24
PRINTS PR00406 Cytochrome B5 reductase signature - - 104 118 5.1E-8
PANTHER PTHR47354 NADH OXIDOREDUCTASE HCR - - 18 365 1.2E-97
PRINTS PR00406 Cytochrome B5 reductase signature - - 220 228 5.1E-8
PRINTS PR00406 Cytochrome B5 reductase signature - - 67 74 5.1E-8
SUPERFAMILY SSF52343 Ferredoxin reductase-like, C-terminal NADP-linked domain IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain 107 250 2.23E-36
Pfam PF00175 Oxidoreductase NAD-binding domain IPR001433 Oxidoreductase FAD/NAD(P)-binding 129 234 5.8E-13
SUPERFAMILY SSF54292 2Fe-2S ferredoxin-like IPR036010 2Fe-2S ferredoxin-like superfamily 243 366 1.31E-27
PRINTS PR00406 Cytochrome B5 reductase signature - - 127 146 5.1E-8
Gene3D G3DSA:3.10.20.30 - IPR012675 Beta-grasp domain superfamily 259 366 7.9E-23
Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain 290 359 2.0E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.