Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5607

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5607
Name
Replicon	chromosome
Genomic location	6771988 - 6773196 (- strand)

Cross-References

RefSeq	YP_004357147.1
GI	330812685
Entrez	10474918
INSDC	AEA72143.1
NCBI Locus Tag	PSEBR_a5607
UniParc	UPI0002040ED6
UniProtKB Acc	F2K766
UniProtKB ID	F2K766_PSEBN
UniRef100	UniRef100_A0A0D0TA17
UniRef50	UniRef50_Q14HK8
UniRef90	UniRef90_A0A0D0TA17

Product

Feature Type	CDS
Coding Frame	1
Product Name	cobalamine biosynthesis-like protein
Synonyms
Evidence for Translation
Charge (pH 7)	-26.67
Kyte-Doolittle Hydrophobicity Value	-0.204
Molecular Weight (kDa)	45.2
Isoelectric Point (pI)	4.33

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 364 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005068 (531 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5607 Search term: cobalamine biosynthesis-like protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000259199 Zn regulated GTPase metalloprotein activator 1B [Source:HGNC Symbol;Acc:HGNC:17907] E-value: 4.3e-30 Percent Identity: 32.2

References