Pseudomonas sp. UW4, PputUW4_00013 (trkA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015079 potassium ion transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008324 cation transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02080
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00335
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006813 potassium ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.70.1450
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 3 125 4.6E-27
PANTHER PTHR43833 POTASSIUM CHANNEL PROTEIN 2-RELATED-RELATED - - 1 226 7.4E-82
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 19 33 1.5E-29
SUPERFAMILY SSF116726 TrkA C-terminal domain-like IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 136 222 2.62E-11
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 232 376 9.5E-35
SUPERFAMILY SSF116726 TrkA C-terminal domain-like IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 362 446 6.93E-10
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 1 151 4.43E-34
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 73 87 1.5E-29
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 2 16 1.5E-29
FunFam G3DSA:3.30.70.1450:FF:000001 Trk system potassium transporter TrkA - - 142 232 4.8E-48
Gene3D G3DSA:3.30.70.1450 - IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 367 458 1.4E-37
FunFam G3DSA:3.40.50.720:FF:000042 Trk system potassium transporter TrkA - - 233 366 6.0E-63
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 156 224 1.1E-12
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 49 59 1.5E-29
Pfam PF02254 TrkA-N domain IPR003148 Regulator of K+ conductance, N-terminal 235 350 1.8E-26
Gene3D G3DSA:3.30.70.1450 - IPR036721 Regulator of K+ conductance, C-terminal domain superfamily 142 232 7.5E-32
Gene3D G3DSA:3.40.50.720 - - - 233 366 5.6E-49
PRINTS PR00335 TrkA potassium uptake protein signature IPR006036 Potassium uptake protein TrkA 60 70 1.5E-29
FunFam G3DSA:3.40.50.720:FF:000027 Trk system potassium transporter TrkA - - 1 141 7.0E-74
Pfam PF02080 TrkA-C domain IPR006037 Regulator of K+ conductance, C-terminal 390 451 4.5E-12
Gene3D G3DSA:3.40.50.720 - - - 1 141 2.8E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.