Pseudomonas sp. UW4, PputUW4_00016 (def1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0042586 peptide deformylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00163
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 102 120 2.8E-39
FunFam G3DSA:3.90.45.10:FF:000001 Peptide deformylase - - 1 168 7.3E-88
SUPERFAMILY SSF56420 Peptide deformylase IPR036821 Peptide deformylase superfamily 2 165 1.11E-64
NCBIfam TIGR00079 JCVI: peptide deformylase IPR023635 Peptide deformylase 4 161 8.4E-56
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 121 150 2.8E-39
PIRSF PIRSF004749 Pep_def IPR023635 Peptide deformylase 1 168 8.2E-59
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 90 101 2.8E-39
PRINTS PR01576 Peptide deformylase signature IPR023635 Peptide deformylase 33 62 2.8E-39
Hamap MF_00163 Peptide deformylase [def]. IPR023635 Peptide deformylase 2 163 32.426392
Gene3D G3DSA:3.90.45.10 Peptide deformylase IPR036821 Peptide deformylase superfamily 1 168 3.1E-66
Pfam PF01327 Polypeptide deformylase IPR023635 Peptide deformylase 4 153 1.7E-52
PANTHER PTHR10458 PEPTIDE DEFORMYLASE IPR023635 Peptide deformylase 3 165 1.4E-52
CDD cd00487 Pep_deformylase IPR023635 Peptide deformylase 6 144 6.0306E-77

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.