Pseudomonas sp. UW4, PputUW4_00077 (amiD1)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0008745	N-acetylmuramoyl-L-alanine amidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06583	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009253	peptidoglycan catabolic process	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06583	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01471	Putative peptidoglycan binding domain	IPR002477	Peptidoglycan binding-like	199	252	1.1E-8
Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	33	165	4.2E-28
Gene3D	G3DSA:1.10.101.10	-	IPR036366	PGBD superfamily	179	257	2.8E-28
CDD	cd06583	PGRP	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	34	166	3.56549E-29
FunFam	G3DSA:3.40.80.10:FF:000003	N-acetylmuramoyl-L-alanine amidase	-	-	33	178	8.0E-57
SUPERFAMILY	SSF55846	N-acetylmuramoyl-L-alanine amidase-like	IPR036505	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	22	180	6.94E-51
PANTHER	PTHR30417	N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMID	-	-	31	252	2.7E-57
SUPERFAMILY	SSF47090	PGBD-like	IPR036365	PGBD-like superfamily	183	255	1.18E-18
SMART	SM00644	ami_2	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	24	164	1.9E-27
Gene3D	G3DSA:3.40.80.10	-	IPR036505	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	33	178	5.0E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.