Pseudomonas sp. UW4, PputUW4_00171
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03544
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR01352 | JCVI: TonB family C-terminal domain | IPR006260 | TonB/TolA, C-terminal | 192 | 268 | 5.6E-24 |
| SUPERFAMILY | SSF74653 | TolA/TonB C-terminal domain | - | - | 159 | 268 | 1.37E-25 |
| PANTHER | PTHR33446 | PROTEIN TONB-RELATED | - | - | 49 | 269 | 1.1E-25 |
| FunFam | G3DSA:3.30.1150.10:FF:000005 | Protein TonB | - | - | 125 | 269 | 1.2E-69 |
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 95 | 107 | 2.7E-10 |
| Pfam | PF03544 | Gram-negative bacterial TonB protein C-terminal | IPR037682 | TonB, C-terminal | 190 | 268 | 3.3E-23 |
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 117 | 138 | 2.7E-10 |
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 71 | 87 | 2.7E-10 |
| Gene3D | G3DSA:3.30.1150.10 | - | - | - | 118 | 269 | 3.2E-25 |
| PRINTS | PR01217 | Proline rich extensin signature | - | - | 141 | 157 | 2.7E-10 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 96 | 178 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 96 | 184 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.