Pseudomonas sp. UW4, PputUW4_02417 (ahpF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000302 response to reactive oxygen species
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008785 alkyl hydroperoxide reductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07992
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051287 NAD binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 265 275 3.1E-67
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 214 233 2.0E-41
PIRSF PIRSF000238 AhpF IPR012081 Alkyl hydroperoxide reductase subunit F 1 519 0.0
Coils Coil Coil - - 269 289 -
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 351 375 3.1E-67
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 355 373 2.0E-41
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 440 456 2.0E-41
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 403 419 3.1E-67
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 313 331 2.0E-41
FunFam G3DSA:3.40.30.80:FF:000001 Alkyl hydroperoxide reductase subunit F - - 1 199 2.7E-100
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 476 494 3.1E-67
PANTHER PTHR48105 THIOREDOXIN REDUCTASE 1-RELATED-RELATED - - 210 514 6.6E-72
FunFam G3DSA:3.50.50.60:FF:000007 Alkyl hydroperoxide reductase, F subunit - - 325 448 1.7E-59
CDD cd03026 AhpF_NTD_C IPR044141 AhpF, N-terminal domain, C-terminal TRX-fold subdomain 106 193 2.08584E-52
SUPERFAMILY SSF52833 Thioredoxin-like IPR036249 Thioredoxin-like superfamily 106 195 1.71E-20
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 196 512 9.72E-53
NCBIfam TIGR03140 JCVI: alkyl hydroperoxide reductase subunit F IPR012081 Alkyl hydroperoxide reductase subunit F 1 515 0.0
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase IPR023753 FAD/NAD(P)-binding domain 212 502 1.7E-47
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 314 322 3.1E-67
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature - - 466 488 2.0E-41
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 213 235 3.1E-67
SUPERFAMILY SSF52833 Thioredoxin-like IPR036249 Thioredoxin-like superfamily 1 100 1.23E-30
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 325 448 2.4E-98
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 245 260 3.1E-67
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 442 463 3.1E-67
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 215 512 2.4E-98
Gene3D G3DSA:3.40.30.80 - - - 1 199 1.6E-71
Pfam PF13192 Thioredoxin domain IPR012336 Thioredoxin-like fold 124 194 2.5E-7
CDD cd02974 AhpF_NTD_N IPR044142 AhpF, N-terminal domain, N-terminal TRX-fold subdomain 1 94 3.77269E-49
PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature - - 336 348 3.1E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.