Pseudomonas sp. UW4, PputUW4_03343
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF03328
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppuu01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppuu00660 | C5-Branched dibasic acid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PIRSF | PIRSF015582 | Cit_lyase_B | IPR011206 | Citrate lyase beta subunit-like | 1 | 271 | 7.6E-75 |
| Gene3D | G3DSA:3.20.20.60 | - | IPR040442 | Pyruvate kinase-like domain superfamily | 1 | 271 | 9.3E-80 |
| SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | IPR015813 | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | 5 | 223 | 1.64E-56 |
| PANTHER | PTHR32308 | LYASE BETA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G13030)-RELATED | - | - | 5 | 270 | 1.2E-58 |
| Pfam | PF03328 | HpcH/HpaI aldolase/citrate lyase family | IPR005000 | HpcH/HpaI aldolase/citrate lyase domain | 7 | 214 | 1.8E-29 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.