Pseudomonas sp. UW4, PputUW4_03788
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PIRSF | PIRSF006232 | Pirin | IPR012093 | Pirin | 1 | 282 | 1.3E-73 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 15 | 268 | 9.1E-61 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | IPR011051 | RmlC-like cupin domain superfamily | 6 | 283 | 9.31E-70 |
| Pfam | PF02678 | Pirin | IPR003829 | Pirin, N-terminal domain | 25 | 122 | 2.6E-29 |
| Pfam | PF05726 | Pirin C-terminal cupin domain | IPR008778 | Pirin, C-terminal domain | 175 | 271 | 1.6E-18 |
| CDD | cd02909 | cupin_pirin_N | - | - | 18 | 125 | 1.44596E-38 |
| CDD | cd02247 | cupin_pirin_C | - | - | 172 | 242 | 1.22854E-8 |
| PANTHER | PTHR13903 | PIRIN-RELATED | IPR012093 | Pirin | 11 | 271 | 2.0E-45 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 144 | 243 | 9.1E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.