Pseudomonas sp. UW4, PputUW4_03839 (ccmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015232 heme transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015886 heme transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0017004 cytochrome complex assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 102 120 5.9E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 77 100 5.9E-70
NCBIfam TIGR01190 JCVI: heme exporter protein CcmB IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 7 217 6.5E-86
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 194 217 5.9E-70
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 54 71 5.9E-70
PANTHER PTHR30070 HEME EXPORTER PROTEIN B IPR003544 Cytochrome c-type biogenesis protein CcmB 6 211 5.4E-35
Pfam PF03379 CcmB protein IPR003544 Cytochrome c-type biogenesis protein CcmB 7 217 4.3E-71
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 133 156 5.9E-70
PIRSF PIRSF002764 CcmB IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria 1 221 2.9E-79
PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature - - 28 49 5.9E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.