Pseudomonas sp. UW4, PputUW4_03861 (flhA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF005419	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF005419	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0044780	bacterial-type flagellum assembly	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01398	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppuu02040	Flagellar assembly	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.40.50.12790	FHIPEP family, domain 4	IPR042196	FHIPEP, domain 4	605	705	3.0E-24
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	191	208	1.1E-54
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	75	94	1.1E-54
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	242	256	1.1E-54
Gene3D	G3DSA:3.40.30.60	FHIPEP family, domain 1	IPR042194	FHIPEP, domain 1	370	513	2.5E-50
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	142	158	1.1E-54
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	161	179	1.1E-54
PRINTS	PR00949	Type III secretion system inner membrane A protein family signature	IPR001712	Type III secretion system FHIPEP	38	51	1.1E-54
Pfam	PF00771	FHIPEP family	IPR001712	Type III secretion system FHIPEP	31	697	0.0
PIRSF	PIRSF005419	FlhA	IPR001712	Type III secretion system FHIPEP	5	708	0.0
PANTHER	PTHR30161	FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATED	IPR001712	Type III secretion system FHIPEP	13	706	0.0
NCBIfam	TIGR01398	JCVI: flagellar biosynthesis protein FlhA	IPR006301	Flagellar biosynthesis protein FlhA	21	705	0.0
Gene3D	G3DSA:1.10.8.540	FHIPEP family, domain 3	IPR042193	FHIPEP, domain 3	514	601	2.5E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.