Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_1448
|
Name |
algU
|
Replicon | chromosome |
Genomic location | 1628143 - 1628724 (+ strand) |
RefSeq | YP_258576.1 |
GI | 70728827 |
Entrez | 3475796 |
INSDC | AAY90732.1 |
NCBI Locus Tag | PFL_1448 |
UniParc | UPI00000BDF52 |
UniProtKB Acc | Q4KGQ7 |
UniProtKB ID | Q4KGQ7_PSEF5 |
UniRef100 | UniRef100_Q93D72 |
UniRef50 | UniRef50_D0ZSY9 |
UniRef90 | UniRef90_Q06198 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor AlgU
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -5.83 |
Kyte-Doolittle Hydrophobicity Value | -0.508 |
Molecular Weight (kDa) | 22.2 |
Isoelectric Point (pI) | 5.16 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6IN7 | TRANSCRIPTION | 10/24/18 | Crystal structure of AlgU in complex with MucA(cyto) | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.96 | X-RAY DIFFRACTION | 91.1 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000736 (532 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_1448
Search term: algU
Search term: RNA polymerase sigma factor AlgU
|