Pseudomonas protegens Pf-5, PFL_6245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6245
Name
Replicon chromosome
Genomic location 2329336 - 2329647 (+ strand)

Cross-References

RefSeq YP_004842340.1
GI 346642873
Entrez 11124360
INSDC AEK81708.1
NCBI Locus Tag PFL_6245
UniParc UPI000219FF3C
UniProtKB Acc F9XXB6
UniProtKB ID F9XXB6_PSEF5
UniRef100 UniRef100_F9XXB6
UniRef50 UniRef50_Q88K30
UniRef90 UniRef90_F9XXB6

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 2.13
Kyte-Doolittle Hydrophobicity Value -0.104
Molecular Weight (kDa) 10870.3
Isoelectric Point (pI) 8.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 20 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017826 (109 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6245
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.