Pseudomonas protegens Pf-5, PFL_2245 (glnA_1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006807 nitrogen compound metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01230
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004356 glutamate-ammonia ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01230
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006542 glutamine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF16952
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF55931
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc ammonia assimilation cycle I InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfl01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc L-glutamine biosynthesis III InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc ammonia assimilation cycle II InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfl00910 Nitrogen metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc nitrate reduction II (assimilatory) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfl00630 Glyoxylate and dicarboxylate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc nitrate reduction V (assimilatory) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG pfl01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00120 Glutamine synthetase, catalytic domain IPR008146 Glutamine synthetase, catalytic domain 112 438 1.1E-76
SMART SM01230 Gln_synt_C_2 IPR008146 Glutamine synthetase, catalytic domain 111 361 1.9E-70
Gene3D G3DSA:3.10.20.70 - IPR036651 Glutamine synthetase, N-terminal domain superfamily 7 107 5.7E-32
SUPERFAMILY SSF55931 Glutamine synthetase/guanido kinase IPR014746 Glutamine synthetase/guanido kinase, catalytic domain 113 447 5.89E-78
Gene3D G3DSA:3.30.590.10 Glutamine synthetase/guanido kinase, catalytic domain - - 108 451 1.9E-92
Pfam PF16952 Glutamine synthetase N-terminal domain IPR008147 Glutamine synthetase, N-terminal domain 10 110 5.3E-31
PANTHER PTHR43785 GAMMA-GLUTAMYLPUTRESCINE SYNTHETASE - - 16 446 1.1E-86

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.