Pseudomonas protegens Pf-5, PFL_2745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0019867 | outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:SM00965
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF74653 | TolA/TonB C-terminal domain | - | - | 80 | 174 | 3.14E-10 |
| Pfam | PF07660 | Secretin and TonB N terminus short domain | IPR011662 | Secretin/TonB, short N-terminal domain | 31 | 77 | 3.3E-7 |
| Gene3D | G3DSA:3.55.50.30 | - | - | - | 7 | 95 | 1.7E-22 |
| SMART | SM00965 | STN_2 | IPR011662 | Secretin/TonB, short N-terminal domain | 29 | 80 | 6.2E-10 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.