Pseudomonas protegens Pf-5, PFL_3002

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3002
Name
Replicon chromosome
Genomic location 3451300 - 3452412 (- strand)

Cross-References

RefSeq YP_260108.1
GI 70730369
Entrez 3476092
INSDC AAY92274.1
NCBI Locus Tag PFL_3002
UniParc UPI000054D6C1
UniProtKB Acc Q4KCC5
UniProtKB ID Q4KCC5_PSEF5
UniRef100 UniRef100_Q4KCC5
UniRef50 UniRef50_Q9I735
UniRef90 UniRef90_Q4KCC5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.09
Kyte-Doolittle Hydrophobicity Value -0.201
Molecular Weight (kDa) 40713.1
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 52 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000095 (329 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3002

Human Homologs

References

No references are associated with this feature.