Pseudomonas protegens Pf-5, PFL_3695

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3695
Name
Replicon chromosome
Genomic location 4287894 - 4288265 (- strand)

Cross-References

RefSeq YP_260797.1
GI 70731056
Entrez 3476968
INSDC AAY92961.1
NCBI Locus Tag PFL_3695
UniParc UPI000054D970
UniProtKB Acc Q4KAD6
UniProtKB ID Q4KAD6_PSEF5
UniRef100 UniRef100_Q4KAD6
UniRef50 UniRef50_Q4KAD6
UniRef90 UniRef90_Q4KAD6

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 1.40
Kyte-Doolittle Hydrophobicity Value -0.381
Molecular Weight (kDa) 13.7
Isoelectric Point (pI) 8.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 47 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000046 (378 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3695
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.