Pseudomonas protegens Pf-5, PFL_4430 (cobB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003824	catalytic activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07685	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0042242	cobyrinic acid a,c-diamide synthase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR43873	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfl00860	Porphyrin and chlorophyll metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd05388	CobB_N	-	-	8	192	1.54812E-78
SUPERFAMILY	SSF52317	Class I glutamine amidotransferase-like	IPR029062	Class I glutamine amidotransferase-like	237	428	1.26E-30
Pfam	PF07685	CobB/CobQ-like glutamine amidotransferase domain	IPR011698	CobB/CobQ-like glutamine amidotransferase	240	421	4.5E-33
Pfam	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain	IPR002586	CobQ/CobB/MinD/ParA nucleotide binding domain	10	188	6.7E-13
Gene3D	G3DSA:3.40.50.880	-	IPR029062	Class I glutamine amidotransferase-like	238	424	3.8E-12
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	9	194	2.1E-38
CDD	cd03130	GATase1_CobB	-	-	241	429	4.89687E-75
Hamap	MF_00027	Hydrogenobyrinate a,c-diamide synthase [cobB].	IPR004484	Cobyrinic acid a,c-diamide synthase CbiA	7	422	37.406082
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	47	182	5.1E-10
NCBIfam	TIGR00379	JCVI: hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolyzing)	IPR004484	Cobyrinic acid a,c-diamide synthase CbiA	10	427	1.6E-79
PANTHER	PTHR43873	COBYRINATE A,C-DIAMIDE SYNTHASE	IPR004484	Cobyrinic acid a,c-diamide synthase CbiA	8	430	2.0E-120

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.