Pseudomonas protegens Pf-5, PFL_4431 (cobO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009236 cobalamin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00561
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl00860 Porphyrin and chlorophyll metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF015617 Adenosyltransferase_CobA IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 6 203 1.1E-69
PANTHER PTHR46638 CORRINOID ADENOSYLTRANSFERASE IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 6 202 2.6E-66
Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain 1 26 3.5E-9
Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 34 202 9.5E-57
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 11 203 1.6E-64
CDD cd00561 CobA_ACA IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 34 202 2.03487E-85
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 13 202 2.27E-69
NCBIfam TIGR00708 JCVI: cob(I)yrinic acid a,c-diamide adenosyltransferase IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/BtuR 31 202 1.6E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.