Pseudomonas protegens Pf-5, PFL_4609 (pgl)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0005975 | carbohydrate metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:cd01400
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006098 | pentose-phosphate shunt |
Inferred from Sequence Model
Term mapped from: InterPro:cd01400
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0017057 | 6-phosphogluconolactonase activity |
Inferred from Sequence Model
Term mapped from: InterPro:cd01400
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pfl01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pfl00030 | Pentose phosphate pathway | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | pfl01200 | Carbon metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | Entner-Doudoroff pathway I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | chitin derivatives degradation | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | pfl01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pfl01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | chitin degradation I (archaea) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | pfl01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF100950 | NagB/RpiA/CoA transferase-like | IPR037171 | NagB/RpiA transferase-like | 14 | 236 | 2.63E-56 |
| NCBIfam | TIGR01198 | JCVI: 6-phosphogluconolactonase | IPR005900 | 6-phosphogluconolactonase, DevB-type | 19 | 229 | 4.4E-59 |
| Pfam | PF01182 | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | IPR006148 | Glucosamine/galactosamine-6-phosphate isomerase | 20 | 235 | 4.3E-51 |
| PANTHER | PTHR11054 | 6-PHOSPHOGLUCONOLACTONASE | IPR039104 | 6-Phosphogluconolactonase | 16 | 235 | 6.0E-31 |
| Gene3D | G3DSA:3.40.50.1360 | - | - | - | 14 | 237 | 1.7E-60 |
| CDD | cd01400 | 6PGL | IPR005900 | 6-phosphogluconolactonase, DevB-type | 23 | 237 | 1.36208E-68 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.