Pseudomonas protegens Pf-5, PFL_5214
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1330.40 | - | IPR035959 | RutC-like superfamily | 7 | 156 | 5.0E-47 |
| SUPERFAMILY | SSF55298 | YjgF-like | IPR035959 | RutC-like superfamily | 13 | 156 | 2.36E-46 |
| PANTHER | PTHR43760 | ENDORIBONUCLEASE-RELATED | IPR013813 | Endoribonuclease L-PSP/chorismate mutase-like | 14 | 157 | 5.9E-41 |
| CDD | cd02199 | YjgF_YER057c_UK114_like_1 | IPR013813 | Endoribonuclease L-PSP/chorismate mutase-like | 17 | 156 | 1.49488E-67 |
| Pfam | PF14588 | YjgF/chorismate_mutase-like, putative endoribonuclease | IPR013813 | Endoribonuclease L-PSP/chorismate mutase-like | 28 | 153 | 7.1E-23 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.